R. Bordoloi, C. Réda, S. Bej and O. Wolkenhauer. Handling Missing Data in Downstream Tasks With Distribution-Preserving Guarantees Under review, 2025 DOI-10.48550/arXiv.2501.13786
M. Jourdan and C. Réda. An Anytime Algorithm for Good Arm Identification Under review, 2023 DOI-10.48550/arXiv.2310.10359
R. Bordoloi, C. Réda, O. Trautmann, S. Bej and O. Wolkenhauer. Multivariate functional linear discriminant analysis for partially‑observed time series Machine Learning, 2025 DOI-10.1007/s10994-025-06741-0
C. Réda, J.-J. Vie and O. Wolkenhauer. Comprehensive evaluation of collaborative filtering in drug repurposing In Scientific Reports, 2025 DOI-10.1038/s41598-025-85927-x
C. Réda, J.-J. Vie and O. Wolkenhauer. Joint Embedding-Classifier Learning for Interpretable Collaborative Filtering In BMC Bioinformatics, 2025 DOI-10.1186/s12859-024-06026-8
A. Dufour, A. Heydari-Olya, S. Foulon, C. Réda, et al. Neonatal inflammation impairs developmentally-associated microglia and promotes a highly reactive microglial subset In Brain, Behavior, and Immunity, 2025 DOI-10.1016/j.bbi.2024.09.019
C. Réda, B. Villoutreix, and A. Delahaye-Duriez. Repositionnement de médicaments In La Revue du Praticien, 2024 (full text (paywall)).
C. Réda, J.-J. Vie and O. Wolkenhauer. stanscofi and benchscofi: a new standard for drug repurposing by collaborative filtering In Journal of Open Source Software, 2024 DOI-10.21105/joss.05973
C. Réda and A. Delahaye-Duriez. NORDic: a Network-Oriented package for the Repurposing of Drugs In Journal of Open Source Software, 2023 DOI-10.21105/joss.05532
C. Réda, S. Vakili, and É. Kaufmann. Near-Optimal Collaborative Learning With Bandits In Proceedings of the 36th Conference on Neural Information Processing Systems, 2022 HAL-03825099 [Selected as oral]
C. Réda and A. Delahaye-Duriez. Prioritization of Candidate Genes Through Boolean Networks In Proceeedings of the 20th International Conference on Computational Methods in Systems Biology, 2022 DOI-10.1007/978-3-031-15034-0_5 . In accordance with Springer Nature’s sharing policy: accepted manuscript [Best student paper award]
C. Réda, A. Tirinzoni, and R. Degenne. Dealing With Misspecification In Fixed-Confidence Linear Top-m Identification In Proceedings of the 35th Conference on Neural Information Processing Systems, 2021 HAL-03409205.
C. Réda, É. Kaufmann, and A. Delahaye-Duriez. Top-m identification for linear bandits In Proceedings of the 24th International Conference on Artificial Intelligence and Statistics, 2021 HAL-03172145.
C. Réda, É. Kaufmann, and A. Delahaye-Duriez. Machine learning applications in drug development In Computational and Structural Biotechnology Journal, 2020 DOI-10.1016/j.csbj.2019.12.006.
C. Réda and B. Wilczyński. Automated Inference of Gene Regulatory Networks Using Explicit Regulatory Modules In Journal of Theoretical Biology, 2020 DOI-10.1016/j.jtbi.2019.110091. In accordance with Elsevier’s sharing policy: accepted manuscript.
A. Delahaye-Duriez, C. Réda and P. Gressens. Identification de cibles thérapeutiques et repositionnement de médicaments par analyses de réseaux géniques In médecine/sciences, 2019 DOI-10.1051/medsci/2019108 (full text).
F. Romano, C. Réda and A. Delahaye-Duriez. Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2025) Bordeaux (France), July 8th-11th, 2025
C. Réda. Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2025) Bordeaux (France), July 8th-11th, 2025
C. Réda. NORDic: drug response simulation and drug repurposing with Boolean networks @GT Bioss Days 2024: CoLoMoTo Workshop (program).
C. Réda. NORDic: End-to-end inference for Boolean networks @Atelier GT Bioss 2024: Évaluation de méthodes d’inférence de modèles dynamiques (program).
F. Romano, C. Réda and A. Delahaye-Duriez. Network-centric analysis of a post-traumatic stress disorder regulatory model @ISMB/ECCB’25
C. Réda, J.-J. Vie and O. Wolkenhauer. JELI: an interpretable embedding-learning recommender system for drug repurposing @ECCB’24
C. Réda, J.-J. Vie and O. Wolkenhauer. JELI: an interpretable embedding-learning recommender system for drug repurposing @JOBIM’24
C. Réda, J.-J. Vie and O. Wolkenhauer. Towards a large-scale benchmark of collaborative filtering in drug repurposing @SMPGD’24
C. Réda. Seminar at Inserm Neurodiderot Paris (France), March 13th, 2025
C. Réda. Seminar at Inserm PARCC Paris (France), February 18th, 2025
C. Réda Combination of gene regulatory networks and sequential machine learning for drug repurposing TEL-03846072 Viva on 09/09/22
